Preserving Diversity, Insuring Our Future

ARS的新材料,留着,以后有点用,原文地址:http://www.ars.usda.gov/is/AR/archive/jan10/plant0110.htm

Plant Germplasm
Preserving Diversity, Insuring Our Future

Germplasm line derived from a wild African cotton species and located in College Station, Texas: Click here for photo caption.
Germplasm line derived from a wild African cotton species and located in College Station, Texas. 
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If it were a museum, chances are it would be better known. But the U.S. National Plant Germplasm System (NPGS) is a vital network of genebanks where plants from around the world are curated, propagated, analyzed, and distributed for scientific use.

Most of the 511,000 samples, or accessions, of seeds, tissues, and whole plants are not on public display. They are kept at more than 20 Agricultural Research Servicegenebanks, many of which receive additional support from universities and state agricultural experiment stations.

The materials are available to researchers and educators globally, and as one of the most extensive collections of crop diversity in the world, NPGS plays an integral role in maintaining the U.S. and world supply of food, fiber, and other economic crops.

In addition to its vital role in today’s agricultural research, NPGS serves as a kind of insurance policy for providing the resources to meet challenges to U.S. and global agriculture presented by evolving pests, pathogens, and environmental changes. It also provides producers with the crop diversity necessary to keep up with changing markets.

Maintaining diverse collections of living plant materials from around the world is a daunting task. Different crops and the wild species related to them have different storage and propagation requirements. Seeds of many species can be stored by drying and freezing, whereas seeds of other species cannot survive such treatments. Many fruit crops and other species must be maintained as whole plants in the field or in protected greenhouses or screenhouses to maintain their health, disease-free status, and unique genetic nature.

A sample of the range of colors, shapes, sizes, and textures of cotton leaves, bolls, and seeds in the National Cotton Germplasm Collection: Click here for full photo caption.
A sample of the range of colors, shapes, sizes, and textures of cotton leaves, bolls, and seeds in the National Cotton Germplasm Collection. Colored cottons, such as the orange and tan ones on the left, are used to make dye-free clothing and are native to Central and South America. The red-colored cotton boll, shown on the right, deters insect feeding.  Sharply dissected leaves, such as those near the bottom, help keep the cotton canopy aerated and free of mold in humid climates. (D1581-1)

“We want to make sure we have a broad base for every important crop in the collection, from both a taxonomic and a geographic standpoint, so when the need arises, we have the necessary genetic tools available,” says Gary Kinard, research leader of the National Germplasm Resources Laboratory in Beltsville, Maryland, which coordinates efforts to acquire, document, and distribute NPGS materials.

ARS shares the materials free of charge with researchers and educators around the world. NPGS mailed 183,000 samples to users in the United States and more than 75 other countries in 2008. ARS researchers are using the collection for a wide range of purposes, such as addressing water shortages in California’s Central Valley, combating a nematode that costs U.S. cotton growers an estimated $100 million each year, and finding resistance to diseases and pests that threaten the existence of important crops.

The uses of the collection are practically infinite, so only a few examples are given here.

Scientific Value

In California, almond production is affected by water availability. In addition, newly planted almond orchards often experience replant disease, a syndrome caused by an antagonistic microbial community in the soil. Malli Aradhya, a geneticist at the National Clonal Germplasm Repository for Tree Fruit and Nut Crops and Grapes in Davis, California, is searching the ARS collection of almond species from Asia to identify new germplasm accessions with the genetic traits that help combat replant disease and improve drought tolerance.

In College Station, Texas, geneticist and curator of the National Cotton Germplasm Collection, inspects the variation in leaf shape and coloration among cotton lines: Click here for full photo caption.
In College Station, Texas, James Frelichowski, geneticist and curator of the National Cotton Germplasm Collection, inspects the variation in leaf shape and coloration among cotton lines.
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Nematodes are microscopic worms that can sometimes destroy up to 50 percent of the cotton crop in fields from Texas to Florida. Plant pathologist Alois Bell and colleagues used an African species of cotton that resists the reniform nematode, a common pest, to help cotton growers address part of the nematode threat. By crossing and backcrossing resistance from the wild African species into specially developed hybrids, they developed lines that produce quality fiber and resist the reniform nematode. Bell and colleagues, who recently released the seed of two lines to breeders, originally obtained the African species from the National Cotton Germplasm Collection, which is part of the ARS Crop Germplasm Research Unit at College Station, Texas.

Maintaining the cotton collection isn’t easy. Cotton seeds must be regrown every 10 years, and there are 9,300 different accessions of cotton. Curator James Frelichowski must keep seeds at 4˚C (39˚F) and at 20–23 percent humidity. Under those conditions, seeds remain viable for at least 10 years. New plants are propagated at nurseries in College Station and in Tecoman, Mexico. (See “Freeze-Drying Is Key to Saving Fungal Collection” in this issue.) The Mexican nursery provides an extended growing season and a good site for cultivation of a wide assortment of cotton.

Worldwide Plant Explorations Enhance Collections

ARS has a long-running program, active since 1898, to acquire new samples for its collections. Each year, researchers conduct about 15 expeditions, coordinated by the Beltsville germplasm laboratory, to search for a range of crops and crop relatives with unique traits, such as drought tolerance and pest and pathogen resistance. Foreign explorations are conducted with collaboration from institutions in host countries. Aradhya, for instance, collected more than 145 new accessions of fruit and nut germplasm in trips to Azerbaijan in 2007 and 2008. Such trips can have long-range benefits. A peanut found in a Brazilian market in 1952 is a source for resistance to a wilt virus of U.S. peanuts. A wheat plant collected in Turkey in 1948 effectively resisted a fungal pathogen that emerged as a major threat 15 years later. Its genetics are now incorporated into virtually every wheat variety grown in the Pacific Northwest.

Tracking Requests

Most requests for materials are filed through the Germplasm Resources Information Network (GRIN), an online database (www.ars-grin.gov) that identifies and keeps track of every sample in the collection. Paul Red Elk, a Lakota Sioux youth counselor and educator, has been accessing the database for 6 years to acquire seeds of corn, beans, and onions to teach Native American children, ages 6 to 16, about their ancestral ways in Farmington, Minnesota. His program is designed to instill pride in at-risk children, in part by getting them involved in community gardening. He likes using the GRIN database because it provides accurate descriptions of the origins of the seeds and other materials in the collections.

The youth grow corn, beans, and squash in circular patterns and raise native grasses, wild onions, and wild garlic for soups and stews, as Native Americans once did.

“We try to teach them that this is the way people used to eat,” he says.—By Dennis O’Brien, Agricultural Research Service Information Staff.

Map: U.S. National Plant Germplasm System
This research is part of Plant Diseases (#303) and Plant Genetic Resources, Genomics, and Genetic Improvement (#301), two ARS national programs described at www.nps.ars.usda.gov.

To reach scientists mentioned in this article, contact Dennis O’Brien, USDA-ARS Information Staff, 5601 Sunnyside Ave., Beltsville, MD 20705-5129; (301) 540-1624.

Plant Germplasm: Preserving Diversity, Insuring Our Future” was published in the January 2010 issue ofAgricultural Research magazine.

其相关新闻稿,应该学习一下

ARS Plant Collections Help Safeguard Crops

(PhysOrg.com) — In the months ahead, Agricultural Research Service (ARS) scientists plan to collect walnuts from Kyrgyzstan, grasses from Russia, and carrots and sunflowers from fields across the Southeastern United States in efforts that will enhance one of the nation’s most effective tools for protecting the food supply.

Researchers will make the trips to collect plants with useful characteristics. The collected material will become part of the U.S. National Plant Germplasm System (NPGS), a network of gene banks that plays an integral role in preserving  that can be used to combat emerging pests, pathogens, diseases and other threats to the world’s supply of food and fiber.

The NPGS collections are made up of approximately 511,000 samples of seeds, tissues and whole plants kept at more than 20 ARS gene banks around the country. Many of the gene banks also receive support from universities and state agricultural experiment stations.

ARS scientists use collection materials for research and mail out thousands of samples of materials free of charge each year to researchers and educators in the United States and countries throughout the world.

ARS also funds approximately 15 expeditions every year to search for new samples of crops and crop relatives with unique traits, such as  and . The trips, coordinated by the ARS National Germplasm Resources Lab (NGRL) in Beltsville, Md., are conducted with collaboration from host countries and include benefits for these countries.

Useful traits in the samples added to the NPGS may be incorporated into crop cultivars, often many years later. For example, a peanut found in a Brazilian market in 1952 is a source for resistance to a wilt virus for most of the peanuts grown in the Southeastern United States and in many other nations. A wheat plant collected in Turkey in 1948 effectively resisted a  that emerged as a major threat 15 years later. Its genetics are now incorporated into virtually every wheat variety grown in the Pacific Northwest.

Requests for material are filed through the Germplasm Resources Information Network (GRIN), an online database (www.ars-grin.gov) that identifies and keeps track of every sample in the collection.

Read more about this and other ARS collections in the January 2010 issue of Agricultural Research magazine.

Provided by USDA Agricultural Research Service

Preserving the Past to Protect Our Future

刚在博客右下角的google RSS看到的一篇科普新闻文章,ARS信息部门的头头写的他们的一个科学家在厄瓜多尔做的资源保护工作。个人觉得其标题取得不错,“保存过去以保护未来”,就像原来《走进科学》当年给我们做一期节目《寻找失落的基因-中国国家种质库》(详见./oldblog/article.asp?id=138)一个意思,呵呵。有时英文比中文更好表达意思,像这个标题,我就想了很久,也没能想出一个完美的中文村题。

该文还是给了我们一些有益的启示的。作物种质资源保护工作是一项比较难以开展的工作,多数古老的农家品种一般都栽培在经济发展相对比较落后、交通闭塞的地区,随着经济的发展,这些地区农业人口纷纷外出务工,农业人口减少,地越种越少,再加上这些老品种在栽培经济性方面普遍不如商业品种,其生存形势是岌岌可危。虽然我们国家在过去的几十年里进行过大规模的资源考察和征集工作,但收集到的资源数量应该还是远远少于实际存在资源数的,这一点能明显从我国农作物资源分布图中看出来,比如说云南地区的资源分布就明显与实际情况不符,后藏地区资源如此众多是因为开展过一次大规模的西藏地区农作物考察收集工作,效果极其明显。所以,如何结合当地经济发展的议题开展资源保护与抢救性收集工作应是当前资源工作的重要内容。很明显的一点,有价值的东西才能存在,资源只有得到利用才会得到更好的保护与发展。像文中提到的充分利用安第斯山区特色作物资源进行特色农产品深加工开发、手工艺品开发和特色农家旅游等就是十分好的借鉴。这样既保护了当地作物多样性,又为当地百姓谋得一条特色经济发展之路。

crop
中国主要农作物种质资源地理分布(the Atlas of Chinese main crops germplasm resources)

中国主要农作物种质资源地理分布图(来源于http://www.cgris.net

文章里的中文是我的注。

以下资料来源于http://www.swnewsherald.com,原文链接为http://www.swnewsherald.com/online_contentcrf/2009/09/essept09_3crops.php,

作者为SANDY MILLER HAYS, Agricultural Research Service

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Preserving the Past to Protect Our Future

By SANDY MILLER HAYS, Agricultural Research Service
Agricultural research isn’t all “sows, cows and plows,” with a few microscopes and DNA sequencers thrown in. Just ask Karen Williams.
She’s a botanist in the Plant Exchange Office of the Agricultural Research Service (ARS) National Germplasm Resources Laboratory in Beltsville, Md., right outside of Washington, D.C. But when Dr. Williams wants to get out town, she’s not thinking about Philadelphia or New York. Her “getaway” is the town of Cotacachi, Ecuador, in the heart of what some consider one of the cradles of world agriculture.
That’s where Dr. Williams works with an international team of scientists to help conserve traditional crops and, at the same time, contribute to the livelihoods of the local people.//说是说替人保护资源,造福当地人,然后呢。。。看下面

In the communities around Cotacachi, tucked away in the northern Andean highlands of Ecuador, people have farmed for thousands of years. The crops they grow are both familiar and not familiar — yes, there’s corn, but there are 30 varieties of it. Beans? The Quichua-speaking farmers and backyard gardeners have 40 varieties.  //丰富的资源啊,看上的是这些东西
These native crops can be an untapped treasure trove for scientists seeking solutions to modern American agriculture’s problems. Often, an ancient version of a crop contains genes that can help a modern version of that same crop in the United States overcome a pest or disease. It’s just a matter of tapping into those long-ago genetics and incorporating the needed genes into a plant breeding program that melds old with new. //利用这些古老资源所蕴含的丰富基因解决美国现代农业生产中的重要问题,这才是真正目的
But in Cotacachi, these ancient crops are more than just a genetic resource; they’re a way of life and the basis of food security. Yet, as has happened in many rural areas, including in the United States, life is changing in Cotacachi. Many families now rely on income from off the family farm, and the men often work away from those farms.
This is where Dr. Williams comes in. She’s been going to Ecuador since 1995, when she first went there to help reestablish Ecuador’s national peanut germplasm collection, fill gaps in the U.S. Department of Agriculture (USDA) peanut germplasm collection, and strengthen U.S.-Ecuadorian collaborations in genetic resources.
But her mission has expanded beyond that in the ensuing years. In partnership with an indigenous community organization called the Union of Indigenous and Peasant Communities (UNORCAC); Bioversity International, and the Ecuadorian National Agricultural Research Institute (INIAP) — the equivalent of ARS in Ecuador — she’s helped set up and now advises a program designed to promote conservation and increase use of local crops in the area. This program is funded in large part by USDA’s Foreign Agricultural Service.
What’s been accomplished? Scientists have preserved samples of the area’s genetic treasure trove in the National Germplasm Bank at the INIAP Santa Catalina Experiment Station near Quito. Farmers worked with the scientists to evaluate the local varieties of crops in a community garden in Cotacachi, and a catalogue was produced to document the vastness of the diversity. Seed fairs give farmers the chance to display and exchange crop varieties.
A food processing plant has been built to develop and package salsas, marmalades and other products made from the local crops. There’s a community-run ethnobotanical garden that provides local midwives with medicinal plants, helps educate local schoolchildren about their cultural heritage, and generates income from visitors coming to see the diversity of local Andean plants.  //为当地农业经济作贡献
The project has financed construction of rustic rural lodges owned by local families who offer lodging to those visitors. Visitors can learn about traditional crops and farm practices as the families prepare meals made with the yields of their dooryard gardens. The much-needed income that comes from the visitors helps encourage continuing conservation of the traditional crops. //类似于“农家乐”的经营项目
Local women have formed cooperatives that use the crops to make a variety of items offered for sale to tourists: handcrafted necklaces made from native variegated lima beans called “tortas,” for example, and traditional sandals and decorative weavings from the fiber of the cabuyo plant, a relative of agave.
All this activity helps ensure the continuation of those ancient crops, so important to the people of Cotacachi, and to the continued success of the crops that we count on to feed ourselves in this country. And it’s definitely not “just another day in the lab” for Dr. Karen Williams!